species:   Artha
pid:       MI0015815
parent:    ath-MIR4221
paralog:   
locus:     4:8460516-8460662
matures:   ['UUUUCCUCUGUUGAAUUCUUGC', 'AAGAGUUUAAAAGUGGUGAAAC']
srr:       SRR9216053
genome:    /Users/jax/+Genomes/Plant_genomes/Artha.TAIR10_chr_all.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216053.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216053.cram 4:8460516-8460662

0 out of bounds
1 alignments
1 proper strand
1 stranded perfect matches

                        ***********************                                                                    ***********************         
UAGUAUAUCCGUUUCACAGUUUUUCCUCUGUUGAAUUCUUGCACUAGCUUUCAUAUGGGCCAUAUUAAGUUACAUGUGGGUGGGUGCCGUAACAGUGCAGCAACCAUUCUGCUAGCUUGUGCAAGAGUUUAAAAGUGGUGAAACUUU
.................((((((.((.((.((((((((((((((.((((..((.((((.((((((........))))))...(.((((......).))).)..))))..))..)))).)))))))))))))).)).)).))))))..
--------------------UUUUCCUCUGUUGAAUUCUUGC--------------------------------------------------------------------------------------------------------- l=22 a=0 c
--------------------------------------------------------------------------------------------------------------------------AAGAGUUUAAAAGUGGUGAAAC--- l=22 a=0 c*
--------------------------UCUGUUGAAUUCUUGCACUAG---------------------------------------------------------------------------------------------------- l=21 a=1 ma
---------------------------------------------------------------------------------------------------------------------UGUGCAAGAGUUUAAAAGUGG--------- l=21 a=0 ma*

--------------------------UCUGUUGAAUUCUUGCACUAG---------------------------------------------------------------------------------------------------- l=21 a=1 (ma)

mb-01011
ax-1011111
ku-01
ss-110111111110
fn-011
